Methanobacterium formicicum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Archaea; p__Methanobacteriota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium; s__Methanobacterium formicicum
Filtered NCBI Taxonomy d__Archaea; p__Euryarchaeota; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium; s__Methanobacterium formicicum
Unfiltered NCBI Taxonomy d__Archaea; p__Euryarchaeota; x__Methanomada group; c__Methanobacteria; o__Methanobacteriales; f__Methanobacteriaceae; g__Methanobacterium; s__Methanobacterium formicicum
NCBI Strain Identifiers Mb9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001316325.1)
Genome Characteristics
CheckM Completeness 99.2%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,494,510 bp
Longest Contig 2,494,510 bp
Scaffold Count 1
N50 Scaffolds 2,494,510 bp
Longest Scaffold 2,494,510 bp
Genome Size 2,494,510 bp
Protein Count 2,417
Coding Density 83.50%
GC Percentage 41.14%
Ambiguous Bases N/A
GTDB representative GCA_001316325.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name Mb9
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2779801
Country None
Date 2015-11-16
Genbank Assembly Accession GCA_001458655.1
Genome Category Isolate
Genome Representation full
Isolate Mb9
Isolation Source soil
Latitude Longitude None
Molecule Count 1
CDS Count 2,372
Refseq Category na
Seq Rel Date 2015/11/16
Spanned Gaps 0
Species Taxid 2162
SSU Count 2
Submitter CEBITEC
Taxid 2162
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None