Thalassobius gelatinovorus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Thalassobius; s__Thalassobius gelatinovorus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Thalassobius; s__Thalassobius gelatinovorus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Thalassobius; s__Thalassobius gelatinovorus
NCBI Strain Identifiers CECT 4357
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 3
23S Count 3
tRNA Count 19
Contig Count 30
N50 Contigs 295,753 bp
Longest Contig 772,382 bp
Scaffold Count 30
N50 Scaffolds 295,753 bp
Longest Scaffold 772,382 bp
Genome Size 3,902,797 bp
Protein Count 3,789
Coding Density 90.16%
GC Percentage 58.44%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Tgelatinovorus_CECT4357_Seqman_Prokka
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3530152
Country None
Date 2015-11-9
Genbank Assembly Accession GCA_001458355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea water Kiel fjord
Latitude Longitude None
Molecule Count N/A
CDS Count 3,751
Refseq Category representative genome
Seq Rel Date 2015/11/09
Spanned Gaps 0
Species Taxid 53501
SSU Count 3
Submitter UVEG
Taxid 53501
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master CYSA00000000.1