Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Shimia; s__Shimia thalassica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Phaeobacter; s__Phaeobacter sp. CECT 7735
NCBI Strain Identifiers CECT 7735
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.91%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 12
N50 Contigs 669,383 bp
Longest Contig 2,174,517 bp
Scaffold Count 12
N50 Scaffolds 669,383 bp
Longest Scaffold 2,174,517 bp
Genome Size 4,358,316 bp
Protein Count 4,070
Coding Density 91.27%
GC Percentage 55.72%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Phaeobacter_sp._CECT7735_Spades_Prokka
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3542137
Country None
Date 2015-11-9
Genbank Assembly Accession GCA_001458215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source surface sea water collected at Malvarrosa Beach
Latitude Longitude None
Molecule Count N/A
CDS Count 4,025
Refseq Category na
Seq Rel Date 2015/11/09
Spanned Gaps 0
Species Taxid 1715693
SSU Count 1
Submitter UVEG
Taxid 1715693
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CYTW00000000.1