Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
NCBI Strain Identifiers 1;KPOI-1;KPOI-1/1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 99.96%
CheckM Contamination 1.21%
CheckM Strain Heterogeneity 22.22
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 62
N50 Contigs 243,334 bp
Longest Contig 586,644 bp
Scaffold Count 60
N50 Scaffolds 375,028 bp
Longest Scaffold 586,644 bp
Genome Size 5,396,495 bp
Protein Count 5,062
Coding Density 88.19%
GC Percentage 57.42%
Ambiguous Bases 24
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM145725v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03222863
Country Netherlands: Groningen
Date 2015-12-04
Genbank Assembly Accession GCA_001457255.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source urine
Latitude Longitude 53.13 N 6.33 E
Molecule Count N/A
CDS Count 5,388
Refseq Category na
Seq Rel Date 2015/12/04
Spanned Gaps 2
Species Taxid 573
SSU Count 1
Submitter unverisity medical center groningen
Taxid 573
Total Gap Length 48
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JUBG00000000.1