Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Gordonia; s__Gordonia sp002009645
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Gordoniaceae; g__Gordonia; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Gordoniaceae; g__Gordonia; s__Gordonia sp. SGD-V-85
NCBI Strain Identifiers SGD-V-85
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002009645.1)
Genome Characteristics
CheckM Completeness 99.82%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 4
23S Count 0
tRNA Count 20
Contig Count 59
N50 Contigs 256,665 bp
Longest Contig 465,275 bp
Scaffold Count 59
N50 Scaffolds 256,665 bp
Longest Scaffold 465,275 bp
Genome Size 5,439,079 bp
Protein Count 4,940
Coding Density 90.51%
GC Percentage 67.93%
Ambiguous Bases N/A
GTDB representative GCA_002009645.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM145690v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04263916
Country India: Veraval coast
Date 2015-12-4
Genbank Assembly Accession GCA_001456905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine sediment
Latitude Longitude None
Molecule Count N/A
CDS Count 4,881
Refseq Category na
Seq Rel Date 2015/12/04
Spanned Gaps 0
Species Taxid 1414651
SSU Count 4
Submitter CSIR-National Chemical Laboratory
Taxid 1414651
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNQO00000000.1