Exiguobacterium_A indicum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Exiguobacterales; f__Exiguobacteraceae; g__Exiguobacterium_A; s__Exiguobacterium_A indicum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__; g__Exiguobacterium; s__Exiguobacterium enclense
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; x__Bacillales incertae sedis; x__Bacillales Family XII. Incertae Sedis; g__Exiguobacterium; s__Exiguobacterium enclense
NCBI Strain Identifiers NIO-1109
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001939065.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 4
23S Count 2
tRNA Count 19
Contig Count 11
N50 Contigs 678,750 bp
Longest Contig 1,273,491 bp
Scaffold Count 11
N50 Scaffolds 678,750 bp
Longest Scaffold 1,273,491 bp
Genome Size 3,252,807 bp
Protein Count 3,343
Coding Density 89.62%
GC Percentage 46.77%
Ambiguous Bases N/A
GTDB representative GCA_001939065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM145689v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04263895
Country India: Chora Island
Date 2015-12-4
Genbank Assembly Accession GCA_001456895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source marine sediment
Latitude Longitude None
Molecule Count N/A
CDS Count 3,280
Refseq Category na
Seq Rel Date 2015/12/04
Spanned Gaps 0
Species Taxid 1017277
SSU Count 7
Submitter CSIR-National Chemical Laboratory
Taxid 1017277
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LNQL00000000.1