Clostridium butyricum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium butyricum
NCBI Strain Identifiers KNU-L09
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006742065.1)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 11
23S Count 11
tRNA Count 20
Contig Count 2
N50 Contigs 3,824,894 bp
Longest Contig 3,824,894 bp
Scaffold Count 2
N50 Scaffolds 3,824,894 bp
Longest Scaffold 3,824,894 bp
Genome Size 4,627,894 bp
Protein Count 4,101
Coding Density 84.02%
GC Percentage 28.74%
Ambiguous Bases N/A
GTDB representative GCA_006742065.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM145606v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04293668
Country South Korea
Date 2015-12-9
Genbank Assembly Accession GCA_001456065.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source fecal sample
Latitude Longitude None
Molecule Count 2
CDS Count 4,011
Refseq Category representative genome
Seq Rel Date 2015/12/09
Spanned Gaps 0
Species Taxid 1492
SSU Count 11
Submitter Shin's Lab., Kyungpook National University
Taxid 1492
Total Gap Length 0
Translation Table 11
tRNA Count (total) 87
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None