Mycoplasmoides pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Mycoplasmatales; f__Mycoplasmoidaceae; g__Mycoplasmoides; s__Mycoplasmoides pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma pneumoniae
NCBI Strain Identifiers CIP12267
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001272835.1)
Genome Characteristics
CheckM Completeness 98.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 16
N50 Contigs 127,933 bp
Longest Contig 191,477 bp
Scaffold Count 16
N50 Scaffolds 127,933 bp
Longest Scaffold 191,477 bp
Genome Size 805,308 bp
Protein Count 766
Coding Density 90.79%
GC Percentage 39.86%
Ambiguous Bases 1
GTDB representative GCA_001272835.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM145573v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03142259
Country None
Date 2015-12-3
Genbank Assembly Accession GCA_001455735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Throat swab
Latitude Longitude None
Molecule Count N/A
CDS Count 754
Refseq Category na
Seq Rel Date 2015/12/03
Spanned Gaps 1
Species Taxid 2104
SSU Count 1
Submitter Capital Institute of Pediatrics
Taxid 2104
Total Gap Length 1
Translation Table 4
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTHC00000000.1