Mycoplasmoides pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Mycoplasmatales; f__Mycoplasmoidaceae; g__Mycoplasmoides; s__Mycoplasmoides pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma pneumoniae
NCBI Strain Identifiers CIP12311
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001272835.1)
Genome Characteristics
CheckM Completeness 98.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 45
N50 Contigs 62,672 bp
Longest Contig 124,032 bp
Scaffold Count 44
N50 Scaffolds 62,672 bp
Longest Scaffold 124,032 bp
Genome Size 802,079 bp
Protein Count 764
Coding Density 89.91%
GC Percentage 39.93%
Ambiguous Bases 33
GTDB representative GCA_001272835.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM145562v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03142254
Country None
Date 2015-12-3
Genbank Assembly Accession GCA_001455625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Throat swab
Latitude Longitude None
Molecule Count N/A
CDS Count 757
Refseq Category na
Seq Rel Date 2015/12/03
Spanned Gaps 34
Species Taxid 2104
SSU Count 2
Submitter Capital Institute of Pediatrics
Taxid 2104
Total Gap Length 116
Translation Table 4
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JTGX00000000.1