Pseudoalteromonas tetraodonis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas tetraodonis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas issachenkonii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas issachenkonii
NCBI Strain Identifiers KCTC 12958
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_002310835.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 2
N50 Contigs 3,402,324 bp
Longest Contig 3,402,324 bp
Scaffold Count 2
N50 Scaffolds 3,402,324 bp
Longest Scaffold 3,402,324 bp
Genome Size 4,131,541 bp
Protein Count 3,649
Coding Density 87.99%
GC Percentage 40.29%
Ambiguous Bases N/A
GTDB representative GCA_002310835.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM145532v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04299559
Country Pacific Ocean
Date 2015-12-2
Genbank Assembly Accession GCA_001455325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea water
Latitude Longitude 47.5 N 152.79999999999995 E
Molecule Count 2
CDS Count 3,634
Refseq Category na
Seq Rel Date 2015/12/02
Spanned Gaps 0
Species Taxid 152297
SSU Count 8
Submitter KCTC (Korean Collection for Type Cultures)
Taxid 152297
Total Gap Length 0
Translation Table 11
tRNA Count (total) 102
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None