Pseudomonas aeruginosa_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers WH-SGI-V-07055
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000017205.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 102
N50 Contigs 199,314 bp
Longest Contig 681,913 bp
Scaffold Count 100
N50 Scaffolds 199,314 bp
Longest Scaffold 709,901 bp
Genome Size 6,757,340 bp
Protein Count 6,313
Coding Density 89.18%
GC Percentage 66.44%
Ambiguous Bases N/A
GTDB representative GCA_000017205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name WH-SGI-V-07055
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04128482
Country USA
Date 2015-11-30
Genbank Assembly Accession GCA_001450355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Hospital
Latitude Longitude None
Molecule Count N/A
CDS Count 6,487
Refseq Category na
Seq Rel Date 2015/11/30
Spanned Gaps 2
Species Taxid 287
SSU Count 1
Submitter Synthetic Genomics Vaccines, Inc.
Taxid 287
Total Gap Length 42
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LLKZ00000000.1