Salmonella arizonae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella arizonae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. arizonae; x__Salmonella enterica subsp. arizonae serovar 62:z36:-; x__Salmonella enterica subsp. arizonae serovar 62:z36:- str. 5335/86
NCBI Strain Identifiers 86;5335;5335/86
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000018625.1)
Genome Characteristics
CheckM Completeness 99.85%
CheckM Contamination 0.24%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 20
N50 Contigs 342,122 bp
Longest Contig 1,029,924 bp
Scaffold Count 20
N50 Scaffolds 342,122 bp
Longest Scaffold 1,029,924 bp
Genome Size 4,625,346 bp
Protein Count 4,358
Coding Density 86.62%
GC Percentage 51.43%
Ambiguous Bases N/A
GTDB representative GCA_000018625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM144892v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03470773
Country USA
Date 2015-11-27
Genbank Assembly Accession GCA_001448925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,567
Refseq Category na
Seq Rel Date 2015/11/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 8
Submitter Laboratory for Foodborne Zoonoses
Taxid 1245396
Total Gap Length 0
Translation Table 11
tRNA Count (total) 77
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LHTK00000000.1