Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus
NCBI Strain Identifiers MRSA_S13
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 30
N50 Contigs 280,907 bp
Longest Contig 584,927 bp
Scaffold Count 30
N50 Scaffolds 280,907 bp
Longest Scaffold 584,927 bp
Genome Size 2,851,839 bp
Protein Count 2,676
Coding Density 83.82%
GC Percentage 32.66%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM144832v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03793210
Country Switzerland: Geneva
Date 2015-11-25
Genbank Assembly Accession GCA_001448325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source skin
Latitude Longitude 46.95 N 7.47 E
Molecule Count N/A
CDS Count 2,952
Refseq Category na
Seq Rel Date 2015/11/25
Spanned Gaps 0
Species Taxid 1280
SSU Count 6
Submitter Genomic Research Laboratory, GRL; Geneva University Hospital, HUG
Taxid 46170
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LFVE00000000.1