Maribacter dokdonensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Maribacter; s__Maribacter dokdonensis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Maribacter; s__Maribacter dokdonensis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Maribacter; s__Maribacter dokdonensis; x__Maribacter dokdonensis DSW-8
NCBI Strain Identifiers DSW-8
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (11 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 16
N50 Contigs 2,230,298 bp
Longest Contig 2,230,298 bp
Scaffold Count 16
N50 Scaffolds 2,230,298 bp
Longest Scaffold 2,230,298 bp
Genome Size 4,434,543 bp
Protein Count 3,795
Coding Density 91.84%
GC Percentage 35.95%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name DSW8_denovo_v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03744428
Country South Korea
Date 2015-11-25
Genbank Assembly Accession GCA_001447995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Seawater
Latitude Longitude None
Molecule Count N/A
CDS Count 3,760
Refseq Category na
Seq Rel Date 2015/11/25
Spanned Gaps 0
Species Taxid 320912
SSU Count 2
Submitter Yonsei University
Taxid 1300346
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LDPE00000000.1