Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Anatum
NCBI Strain Identifiers GT-01
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 4.27%
CheckM Strain Heterogeneity 96.05
5S Count 4
16S Count 8
23S Count 8
tRNA Count 20
Contig Count 3
N50 Contigs 4,879,815 bp
Longest Contig 4,879,815 bp
Scaffold Count 3
N50 Scaffolds 4,879,815 bp
Longest Scaffold 4,879,815 bp
Genome Size 4,995,362 bp
Protein Count 4,721
Coding Density 87.32%
GC Percentage 52.32%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144711v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04274533
Country USA: Tulsa
Date 2015-11-20
Genbank Assembly Accession GCA_001447115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ground turkey
Latitude Longitude 36.1314 N 95.9372 W
Molecule Count 3
CDS Count 5,009
Refseq Category na
Seq Rel Date 2015/11/20
Spanned Gaps 0
Species Taxid 28901
SSU Count 8
Submitter University of Tulsa
Taxid 58712
Total Gap Length 0
Translation Table 11
tRNA Count (total) 82
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None