Streptomyces corchorusii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces corchorusii
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces hygroscopicus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces hygroscopicus; sb__Streptomyces hygroscopicus subsp. limoneus
NCBI Strain Identifiers KCTC 1717
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001514055.1)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 1.31%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 2
N50 Contigs 8,648,026 bp
Longest Contig 8,648,026 bp
Scaffold Count 2
N50 Scaffolds 8,648,026 bp
Longest Scaffold 8,648,026 bp
Genome Size 10,537,932 bp
Protein Count 9,287
Coding Density 86.25%
GC Percentage 71.96%
Ambiguous Bases N/A
GTDB representative GCA_001514055.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144707v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04277307
Country Japan
Date 2015-11-20
Genbank Assembly Accession GCA_001447075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count 2
CDS Count 9,563
Refseq Category na
Seq Rel Date 2015/11/20
Spanned Gaps 0
Species Taxid 1912
SSU Count 6
Submitter KCTC (Korean Collection for Type Cultures)
Taxid 264445
Total Gap Length 0
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None