Pseudomonas citronellolis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas citronellolis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas citronellolis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas citronellolis
NCBI Strain Identifiers TTU2014-008ASC
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900112375.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 3
23S Count 4
tRNA Count 20
Contig Count 162
N50 Contigs 91,489 bp
Longest Contig 287,466 bp
Scaffold Count 162
N50 Scaffolds 91,489 bp
Longest Scaffold 287,466 bp
Genome Size 6,643,225 bp
Protein Count 5,887
Coding Density 86.46%
GC Percentage 67.43%
Ambiguous Bases N/A
GTDB representative GCA_900112375.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM144649v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04099647
Country USA: New Mexico
Date 2015-11-19
Genbank Assembly Accession GCA_001446495.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces
Latitude Longitude None
Molecule Count N/A
CDS Count 5,856
Refseq Category na
Seq Rel Date 2015/11/19
Spanned Gaps 0
Species Taxid 53408
SSU Count 6
Submitter Texas Tech University
Taxid 53408
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKJO00000000.1