Bifidobacterium longum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Bifidobacteriales; f__Bifidobacteriaceae; g__Bifidobacterium; s__Bifidobacterium longum; sb__Bifidobacterium longum subsp. longum
NCBI Strain Identifiers CCUG30698
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000196555.1)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 2,458,004 bp
Longest Contig 2,458,004 bp
Scaffold Count 1
N50 Scaffolds 2,458,004 bp
Longest Scaffold 2,458,004 bp
Genome Size 2,458,004 bp
Protein Count 2,067
Coding Density 87.68%
GC Percentage 60.22%
Ambiguous Bases 26
GTDB representative GCA_000196555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144627v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03785819
Country Sweden
Date 2015-11-19
Genbank Assembly Accession GCA_001446275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 2,103
Refseq Category na
Seq Rel Date 2015/11/19
Spanned Gaps 0
Species Taxid 216816
SSU Count 2
Submitter University College Cork
Taxid 1679
Total Gap Length 0
Translation Table 11
tRNA Count (total) 72
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None