Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers ATCC 43732
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 216
N50 Contigs 78,205 bp
Longest Contig 269,982 bp
Scaffold Count 206
N50 Scaffolds 79,570 bp
Longest Scaffold 269,982 bp
Genome Size 6,532,962 bp
Protein Count 6,170
Coding Density 89.20%
GC Percentage 66.12%
Ambiguous Bases 6
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM144503v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04028056
Country None
Date 2015-11-17
Genbank Assembly Accession GCA_001445035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,318
Refseq Category na
Seq Rel Date 2015/11/17
Spanned Gaps 10
Species Taxid 287
SSU Count 1
Submitter Technical University of Denmark
Taxid 287
Total Gap Length 722
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJZN00000000.1