Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa
NCBI Strain Identifiers ATCC 33355
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 145
N50 Contigs 114,831 bp
Longest Contig 338,466 bp
Scaffold Count 138
N50 Scaffolds 139,459 bp
Longest Scaffold 338,466 bp
Genome Size 6,645,007 bp
Protein Count 6,196
Coding Density 89.57%
GC Percentage 66.28%
Ambiguous Bases 10
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM144476v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04028044
Country None
Date 2015-11-17
Genbank Assembly Accession GCA_001444765.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,353
Refseq Category na
Seq Rel Date 2015/11/17
Spanned Gaps 7
Species Taxid 287
SSU Count 1
Submitter Technical University of Denmark
Taxid 287
Total Gap Length 751
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJZB00000000.1