Psychrobacter piscatorii
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Psychrobacter; s__Psychrobacter piscatorii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Psychrobacter; s__Psychrobacter piscatorii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Moraxellaceae; g__Psychrobacter; s__Psychrobacter piscatorii
NCBI Strain Identifiers LQ58
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 139
N50 Contigs 47,940 bp
Longest Contig 149,861 bp
Scaffold Count 139
N50 Scaffolds 47,940 bp
Longest Scaffold 149,861 bp
Genome Size 3,089,314 bp
Protein Count 2,690
Coding Density 83.50%
GC Percentage 44.05%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM144450v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04270327
Country Pacific Ocean: East Pacific Rise
Date 2015-11-17
Genbank Assembly Accession GCA_001444505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source deep-sea hydrothermal vent sediment
Latitude Longitude 3.10 S 102.55 W
Molecule Count N/A
CDS Count 2,644
Refseq Category na
Seq Rel Date 2015/11/17
Spanned Gaps 0
Species Taxid 554343
SSU Count 2
Submitter Third Institute of Oceanography, State Oceanic Administration
Taxid 554343
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LNDJ00000000.1