Leptospira borgpetersenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii; x__Leptospira borgpetersenii serovar Ballum
NCBI Strain Identifiers 56604
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003046425.1)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 2.35%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 4
N50 Contigs 3,550,837 bp
Longest Contig 3,550,837 bp
Scaffold Count 4
N50 Scaffolds 3,550,837 bp
Longest Scaffold 3,550,837 bp
Genome Size 4,037,579 bp
Protein Count 3,594
Coding Density 81.96%
GC Percentage 40.19%
Ambiguous Bases 3
GTDB representative GCA_003046425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144446v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03785545
Country China: West region
Date 2015-11-17
Genbank Assembly Accession GCA_001444465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source animal
Latitude Longitude 26.03 N 97.21 E
Molecule Count 4
CDS Count 3,872
Refseq Category na
Seq Rel Date 2015/11/17
Spanned Gaps 0
Species Taxid 174
SSU Count 2
Submitter Shanghai Jiao Tong University School of Medicine
Taxid 280505
Total Gap Length 0
Translation Table 11
tRNA Count (total) 38
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None