Pseudoalteromonas phenolica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas phenolica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas phenolica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Pseudoalteromonadaceae; g__Pseudoalteromonas; s__Pseudoalteromonas phenolica
NCBI Strain Identifiers KCTC 12086
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 1.01%
CheckM Strain Heterogeneity 20.0
5S Count 8
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 2
N50 Contigs 3,845,520 bp
Longest Contig 3,845,520 bp
Scaffold Count 2
N50 Scaffolds 3,845,520 bp
Longest Scaffold 3,845,520 bp
Genome Size 4,868,993 bp
Protein Count 4,217
Coding Density 88.36%
GC Percentage 40.58%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144440v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04259808
Country Japan
Date 2015-11-17
Genbank Assembly Accession GCA_001444405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sea water
Latitude Longitude 26.01 N 128.93000000000006 E
Molecule Count 2
CDS Count 4,210
Refseq Category representative genome
Seq Rel Date 2015/11/17
Spanned Gaps 0
Species Taxid 161398
SSU Count 9
Submitter KCTC (Korean Collection for Type Cultures)
Taxid 161398
Total Gap Length 0
Translation Table 11
tRNA Count (total) 113
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None