Lactobacillus_F paraplantarum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus_F; s__Lactobacillus_F paraplantarum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum
NCBI Strain Identifiers L-ZS9
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 3.09%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 3,139,729 bp
Longest Contig 3,139,729 bp
Scaffold Count 1
N50 Scaffolds 3,139,729 bp
Longest Scaffold 3,139,729 bp
Genome Size 3,139,729 bp
Protein Count 2,946
Coding Density 83.26%
GC Percentage 43.95%
Ambiguous Bases 0
GTDB representative GCF_001435655.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144364v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02893814
Country China
Date 2015-11-13
Genbank Assembly Accession GCA_001443645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source superior fermented meat
Latitude Longitude None
Molecule Count 1
Protein Count 2,974
Refseq Category na
Seq Rel Date 2015/11/13
Spanned Gaps 0
Species Taxid 60520
SSU Count 1
Submitter Institute Of Microbiology Chinese Academy of Sciences
Taxid 60520
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None