Enterobacter himalayensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter himalayensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter hormaechei
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter hormaechei
NCBI Strain Identifiers MNCRE22
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002003685.1)
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 0.79%
CheckM Strain Heterogeneity 20.0
5S Count 8
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 59
N50 Contigs 295,251 bp
Longest Contig 763,323 bp
Scaffold Count 52
N50 Scaffolds 452,586 bp
Longest Scaffold 976,457 bp
Genome Size 4,921,320 bp
Protein Count 4,675
Coding Density 89.55%
GC Percentage 55.13%
Ambiguous Bases N/A
GTDB representative GCA_002003685.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM144309v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04105225
Country USA: Minnesota
Date 2015-11-13
Genbank Assembly Accession GCA_001443095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source blood
Latitude Longitude 45.19752230305685 N 94.49066162109375 W
Molecule Count N/A
CDS Count 4,791
Refseq Category na
Seq Rel Date 2015/11/13
Spanned Gaps 7
Species Taxid 158836
SSU Count 5
Submitter University of Minnesota
Taxid 158836
Total Gap Length 832
Translation Table 11
tRNA Count (total) 70
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LKAY00000000.1