Lysobacter antibioticus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter antibioticus
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter antibioticus
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter antibioticus
NCBI Strain Identifiers 76
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001442535.1)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 1.8%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 5,916,388 bp
Longest Contig 5,916,388 bp
Scaffold Count 1
N50 Scaffolds 5,916,388 bp
Longest Scaffold 5,916,388 bp
Genome Size 5,916,388 bp
Protein Count 4,764
Coding Density 84.48%
GC Percentage 66.82%
Ambiguous Bases N/A
GTDB representative GCA_001442535.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM144274v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03275727
Country Netherlands: bulk soil; Zwaagdijk
Date 2015-11-12
Genbank Assembly Accession GCA_001442745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count 1
CDS Count 4,788
Refseq Category na
Seq Rel Date 2015/11/12
Spanned Gaps 0
Species Taxid 84531
SSU Count 2
Submitter NIOO-KNAW
Taxid 84531
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None