Lysobacter enzymogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter enzymogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter enzymogenes
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter enzymogenes
NCBI Strain Identifiers C3
GTDB Type Material Designation not type material
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 1.87%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 109
N50 Contigs 102,913 bp
Longest Contig 430,712 bp
Scaffold Count 1
N50 Scaffolds 6,157,384 bp
Longest Scaffold 6,157,384 bp
Genome Size 6,157,384 bp
Protein Count 4,930
Coding Density 84.45%
GC Percentage 69.91%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM144251v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04158597
Country USA: Nebraska
Date 2015-11-12
Genbank Assembly Accession GCA_001442515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 40.84705731260303 N 96.6620749610114 W
Molecule Count 1
CDS Count 4,904
Refseq Category representative genome
Seq Rel Date 2015/11/12
Spanned Gaps 108
Species Taxid 69
SSU Count 2
Submitter Rutgers, The State University of New Jersey
Taxid 69
Total Gap Length 8215
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None