Campylobacter_D jejuni
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
NCBI Strain Identifiers CVM N9016
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.16%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 43
N50 Contigs 93,309 bp
Longest Contig 313,334 bp
Scaffold Count 43
N50 Scaffolds 93,309 bp
Longest Scaffold 313,334 bp
Genome Size 1,686,843 bp
Protein Count 1,759
Coding Density 94.08%
GC Percentage 30.43%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Campylobacter jejuni CVM N9016 v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02693026
Country USA:OR
Date 2015-11-10
Genbank Assembly Accession GCA_001442295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Chicken Breast
Latitude Longitude None
Molecule Count N/A
CDS Count 1,751
Refseq Category na
Seq Rel Date 2015/11/10
Spanned Gaps 0
Species Taxid 197
SSU Count 1
Submitter FDA
Taxid 197
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JOVD00000000.1