Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Alteromonadaceae; g__Alishewanella; s__Alishewanella agri
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Alishewanella; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Alteromonadales; f__Alteromonadaceae; g__Alishewanella; s__Alishewanella sp. WH16-1
NCBI Strain Identifiers WH16-1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000272005.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.51%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 149
N50 Contigs 77,968 bp
Longest Contig 175,615 bp
Scaffold Count 149
N50 Scaffolds 77,968 bp
Longest Scaffold 175,615 bp
Genome Size 3,488,867 bp
Protein Count 3,253
Coding Density 91.16%
GC Percentage 50.44%
Ambiguous Bases N/A
GTDB representative GCA_000272005.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM144169v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03614207
Country China: Daye; Hubei
Date 2015-11-9
Genbank Assembly Accession GCA_001441695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source copper and iron mine
Latitude Longitude None
Molecule Count N/A
CDS Count 3,232
Refseq Category na
Seq Rel Date 2015/11/09
Spanned Gaps 0
Species Taxid 1651088
SSU Count 2
Submitter Huazhong Agricultural University
Taxid 1651088
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LCWL00000000.1