Mycobacterium chelonae
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium chelonae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides sp. H079
NCBI Strain Identifiers H079
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001632805.1)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.39%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 94
N50 Contigs 170,224 bp
Longest Contig 618,846 bp
Scaffold Count 94
N50 Scaffolds 170,224 bp
Longest Scaffold 618,846 bp
Genome Size 5,726,565 bp
Protein Count 5,796
Coding Density 91.98%
GC Percentage 63.90%
Ambiguous Bases N/A
GTDB representative GCA_001632805.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM144020v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04091150
Country USA: Cincinnati; Ohio
Date 2015-11-06
Genbank Assembly Accession GCA_001440205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source drinking water
Latitude Longitude None
Molecule Count N/A
CDS Count 5,708
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 1720572
SSU Count 1
Submitter US EPA
Taxid 1720572
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJYO00000000.1