Staphylococcus simulans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus simulans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus simulans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus simulans
NCBI Strain Identifiers CJ16
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002902285.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 13
23S Count 16
tRNA Count 20
Contig Count 112
N50 Contigs 235,805 bp
Longest Contig 533,529 bp
Scaffold Count 112
N50 Scaffolds 235,805 bp
Longest Scaffold 533,529 bp
Genome Size 2,671,107 bp
Protein Count 2,607
Coding Density 86.28%
GC Percentage 36.07%
Ambiguous Bases N/A
GTDB representative GCA_002902285.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143985v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04038441
Country China: Hangzhou
Date 2015-11-6
Genbank Assembly Accession GCA_001439855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source tissue from surgical site infection
Latitude Longitude 30.3 N 120.2 E
Molecule Count N/A
CDS Count 2,602
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 1286
SSU Count 12
Submitter The First Affiliated Hospital, School of Medicine, Zhejiang University
Taxid 1286
Total Gap Length 0
Translation Table 11
tRNA Count (total) 64
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LJSL00000000.1