Pseudomonas_E paralactis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E paralactis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas paralactis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas paralactis
NCBI Strain Identifiers DSM 29164
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.8%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 25.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 37
N50 Contigs 652,815 bp
Longest Contig 884,981 bp
Scaffold Count 37
N50 Scaffolds 652,815 bp
Longest Scaffold 884,981 bp
Genome Size 6,015,212 bp
Protein Count 5,352
Coding Density 88.82%
GC Percentage 59.73%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name mG273
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03332051
Country Germany: Southern Germany
Date 2015-11-6
Genbank Assembly Accession GCA_001439735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source raw milk
Latitude Longitude None
Molecule Count N/A
CDS Count 5,450
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 1615673
SSU Count 3
Submitter Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM
Taxid 1615673
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JYLN00000000.1