Pseudomonas_E veronii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E veronii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas veronii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas fluorescens group; s__Pseudomonas veronii
NCBI Strain Identifiers DSM 11331
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (24 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 1.23%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 95
N50 Contigs 176,093 bp
Longest Contig 559,297 bp
Scaffold Count 95
N50 Scaffolds 176,093 bp
Longest Scaffold 559,297 bp
Genome Size 6,997,867 bp
Protein Count 6,274
Coding Density 88.57%
GC Percentage 60.72%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name G8123
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03328800
Country France: Contrexeville; Pavillon Spring
Date 2015-11-6
Genbank Assembly Accession GCA_001439695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source mineral water
Latitude Longitude None
Molecule Count N/A
CDS Count 6,364
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 76761
SSU Count 2
Submitter Zentralinstitut fuer Ernaehrungs- und Lebensmittelforschung (ZIEL), WZW, TUM
Taxid 76761
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JYLL00000000.1