Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Formosa; s__Formosa algae
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Formosa; s__Formosa algae
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Formosa; s__Formosa algae
NCBI Strain Identifiers KMM 3553
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.35%
CheckM Contamination 1.48%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 82
N50 Contigs 104,774 bp
Longest Contig 275,779 bp
Scaffold Count 82
N50 Scaffolds 104,774 bp
Longest Scaffold 275,779 bp
Genome Size 4,292,461 bp
Protein Count 3,673
Coding Density 90.10%
GC Percentage 33.40%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143966v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04202632
Country Russia: Pacific Ocean; Kuril Islands; Island Yankicha; Kraternaya Bay
Date 2015-11-6
Genbank Assembly Accession GCA_001439665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source the brown alga Fucus evanescens
Latitude Longitude 47.303429 N 152.49571000000003 E
Molecule Count N/A
CDS Count 3,627
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 225843
SSU Count 1
Submitter G.B. Elyakov Pacific Institute of Bioorganic Chemistry
Taxid 225843
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LMAK00000000.1