Pediococcus ethanolidurans
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Pediococcus; s__Pediococcus ethanolidurans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Pediococcus; s__Pediococcus ethanolidurans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Pediococcus; s__Pediococcus ethanolidurans
NCBI Strain Identifiers DSM 22301
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 66
N50 Contigs 94,848 bp
Longest Contig 187,416 bp
Scaffold Count 66
N50 Scaffolds 94,848 bp
Longest Scaffold 187,416 bp
Genome Size 2,260,906 bp
Protein Count 2,163
Coding Density 86.12%
GC Percentage 37.18%
Ambiguous Bases 4
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143740v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797818
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001437405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source walls of a distilled-spirit-fermenting cellar
Latitude Longitude None
Molecule Count N/A
CDS Count 2,134
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 319653
SSU Count 1
Submitter Shanghai Majorbio
Taxid 319653
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JQBY00000000.1