Weissella viridescens
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Weissella; s__Weissella viridescens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Weissella; s__Weissella viridescens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Leuconostocaceae; g__Weissella; s__Weissella viridescens
NCBI Strain Identifiers DSM 20410
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.23%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 34
N50 Contigs 86,165 bp
Longest Contig 288,110 bp
Scaffold Count 8
N50 Scaffolds 476,919 bp
Longest Scaffold 527,535 bp
Genome Size 1,537,173 bp
Protein Count 1,505
Coding Density 88.25%
GC Percentage 41.09%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143735v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797781
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001437355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,479
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 26
Species Taxid 1629
SSU Count 0
Submitter Shanghai Majorbio
Taxid 1629
Total Gap Length 9741
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JQBM00000000.1