Limosilactobacillus ingluviei
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus ingluviei
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ingluviei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ingluviei
NCBI Strain Identifiers DSM 14792
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001435775.1)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.56%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 16
Contig Count 192
N50 Contigs 34,273 bp
Longest Contig 100,356 bp
Scaffold Count 111
N50 Scaffolds 57,378 bp
Longest Scaffold 109,700 bp
Genome Size 2,126,433 bp
Protein Count 2,025
Coding Density 84.52%
GC Percentage 49.99%
Ambiguous Bases N/A
GTDB representative GCA_001435775.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143723v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797772
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001437235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source intestinal tract
Latitude Longitude None
Molecule Count N/A
CDS Count 2,024
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 81
Species Taxid 148604
SSU Count 2
Submitter Shanghai Majorbio
Taxid 148604
Total Gap Length 27294
Translation Table 11
tRNA Count (total) 48
Type Material assembly from synonym type material
Unspanned Gaps 0
Version Status latest
WGS Master JQBA00000000.1