Liquorilactobacillus mali_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Liquorilactobacillus; s__Liquorilactobacillus mali_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus mali
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus mali
NCBI Strain Identifiers ATCC 27304
GTDB Type Material Designation type strain of heterotypic synonym
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.21%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 115
N50 Contigs 56,434 bp
Longest Contig 215,169 bp
Scaffold Count 78
N50 Scaffolds 71,424 bp
Longest Scaffold 215,169 bp
Genome Size 2,437,055 bp
Protein Count 2,348
Coding Density 85.00%
GC Percentage 36.40%
Ambiguous Bases 3
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143715v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797767
Country Japan
Date 2015-11-6
Genbank Assembly Accession GCA_001437155.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source wine
Latitude Longitude None
Molecule Count N/A
CDS Count 2,342
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 37
Species Taxid 1618
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1618
Total Gap Length 10147
Translation Table 11
tRNA Count (total) 48
Type Material assembly from synonym type material
Unspanned Gaps 0
Version Status latest
WGS Master JQAR00000000.1