Carnobacterium divergens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Carnobacteriaceae; g__Carnobacterium; s__Carnobacterium divergens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Carnobacteriaceae; g__Carnobacterium; s__Carnobacterium divergens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Carnobacteriaceae; g__Carnobacterium; s__Carnobacterium divergens; x__Carnobacterium divergens DSM 20623
NCBI Strain Identifiers DSM 20623
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000744255.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 48
N50 Contigs 267,264 bp
Longest Contig 538,136 bp
Scaffold Count 35
N50 Scaffolds 359,814 bp
Longest Scaffold 750,197 bp
Genome Size 2,590,634 bp
Protein Count 2,451
Coding Density 88.45%
GC Percentage 34.95%
Ambiguous Bases N/A
GTDB representative GCA_000744255.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143708v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797805
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001437085.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source poultry
Latitude Longitude None
Molecule Count N/A
CDS Count 2,427
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 13
Species Taxid 2748
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1449336
Total Gap Length 550
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JQBS00000000.1