Paralactobacillus selangorensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Paralactobacillus; s__Paralactobacillus selangorensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus selangorensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus selangorensis
NCBI Strain Identifiers ATCC BAA-66
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001437205.1)
Genome Characteristics
CheckM Completeness 98.95%
CheckM Contamination 0.63%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 8
23S Count 6
tRNA Count 20
Contig Count 169
N50 Contigs 529,598 bp
Longest Contig 637,056 bp
Scaffold Count 100
N50 Scaffolds 529,598 bp
Longest Scaffold 640,059 bp
Genome Size 2,181,802 bp
Protein Count 2,190
Coding Density 86.55%
GC Percentage 46.30%
Ambiguous Bases 3
GTDB representative GCA_001437205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143680v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02797769
Country Malaysia
Date 2015-11-6
Genbank Assembly Accession GCA_001436805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,196
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 69
Species Taxid 81857
SSU Count 8
Submitter Shanghai Majorbio
Taxid 81857
Total Gap Length 20141
Translation Table 11
tRNA Count (total) 52
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JQAT00000000.1