Holzapfelia floricola
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Holzapfelia; s__Holzapfelia floricola
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus floricola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus floricola; x__Lactobacillus floricola DSM 23037 = JCM 16512
NCBI Strain Identifiers DSM 23037
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 97.38%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 25
N50 Contigs 213,391 bp
Longest Contig 447,035 bp
Scaffold Count 20
N50 Scaffolds 213,391 bp
Longest Scaffold 447,035 bp
Genome Size 1,289,346 bp
Protein Count 1,264
Coding Density 90.73%
GC Percentage 34.53%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143660v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369446
Country Japan
Date 2015-11-6
Genbank Assembly Accession GCA_001436605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source flower
Latitude Longitude None
Molecule Count N/A
CDS Count 1,238
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 5
Species Taxid 679249
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423744
Total Gap Length 233
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AYZL00000000.1