Lactobacillus ultunensis
Isolate HQ 5S/16S/23S 14 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ultunensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ultunensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ultunensis; x__Lactobacillus ultunensis DSM 16047
NCBI Strain Identifiers DSM 16047
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.03%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 14
Contig Count 105
N50 Contigs 47,983 bp
Longest Contig 136,650 bp
Scaffold Count 105
N50 Scaffolds 47,983 bp
Longest Scaffold 136,650 bp
Genome Size 2,161,766 bp
Protein Count 2,134
Coding Density 88.90%
GC Percentage 35.95%
Ambiguous Bases 13
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143630v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369416
Country Sweden
Date 2015-11-6
Genbank Assembly Accession GCA_001436305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gastric biopsies; stomach mucosa
Latitude Longitude None
Molecule Count N/A
CDS Count 2,091
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 227945
SSU Count 1
Submitter Shanghai Majorbio
Taxid 525365
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZFO00000000.1