Liquorilactobacillus oeni
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Liquorilactobacillus; s__Liquorilactobacillus oeni
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus oeni
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus oeni; x__Lactobacillus oeni DSM 19972
NCBI Strain Identifiers DSM 19972
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 48
N50 Contigs 297,031 bp
Longest Contig 546,032 bp
Scaffold Count 43
N50 Scaffolds 412,601 bp
Longest Scaffold 853,319 bp
Genome Size 2,117,633 bp
Protein Count 2,007
Coding Density 84.13%
GC Percentage 37.32%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143627v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369506
Country Spain
Date 2015-11-6
Genbank Assembly Accession GCA_001436275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Bobal wine
Latitude Longitude None
Molecule Count N/A
CDS Count 1,982
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 5
Species Taxid 303241
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423777
Total Gap Length 155
Translation Table 11
tRNA Count (total) 55
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEH00000000.1