Lentilactobacillus kefiri
Isolate MQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lentilactobacillus; s__Lentilactobacillus kefiri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kefiri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kefiri; x__Lactobacillus kefiri DSM 20587 = JCM 5818
NCBI Strain Identifiers DSM 20587
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001311745.1)
Genome Characteristics
CheckM Completeness 71.25%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 100
N50 Contigs 66,394 bp
Longest Contig 174,445 bp
Scaffold Count 95
N50 Scaffolds 68,014 bp
Longest Scaffold 174,445 bp
Genome Size 2,229,333 bp
Protein Count 2,142
Coding Density 87.16%
GC Percentage 41.67%
Ambiguous Bases N/A
GTDB representative GCA_001311745.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143617v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369455
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001436175.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source kefir grains
Latitude Longitude None
Molecule Count N/A
CDS Count 2,081
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 5
Species Taxid 33962
SSU Count 2
Submitter Shanghai Majorbio
Taxid 1423764
Total Gap Length 204
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AYYV00000000.1