Lacticaseibacillus brantae
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lacticaseibacillus; s__Lacticaseibacillus brantae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brantae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus brantae; x__Lactobacillus brantae DSM 23927
NCBI Strain Identifiers DSM 23927
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 12
N50 Contigs 407,548 bp
Longest Contig 824,330 bp
Scaffold Count 12
N50 Scaffolds 407,548 bp
Longest Scaffold 824,330 bp
Genome Size 1,929,842 bp
Protein Count 1,904
Coding Density 90.25%
GC Percentage 47.48%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143611v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369393
Country USA
Date 2015-11-6
Genbank Assembly Accession GCA_001436115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source feces of Canada goose
Latitude Longitude None
Molecule Count N/A
CDS Count 1,871
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 943673
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423727
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AYZQ00000000.1