Limosilactobacillus mucosae
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus mucosae
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus mucosae
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus mucosae; x__Lactobacillus mucosae DSM 13345
NCBI Strain Identifiers DSM 13345
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (15 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 18
Contig Count 91
N50 Contigs 93,868 bp
Longest Contig 197,339 bp
Scaffold Count 91
N50 Scaffolds 93,868 bp
Longest Scaffold 197,339 bp
Genome Size 2,254,291 bp
Protein Count 2,072
Coding Density 86.69%
GC Percentage 46.40%
Ambiguous Bases 5
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143602v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369406
Country Sweden
Date 2015-11-6
Genbank Assembly Accession GCA_001436025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source small intestine
Latitude Longitude None
Molecule Count N/A
CDS Count 2,036
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 97478
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423771
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEQ00000000.1