Lactobacillus delbrueckii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus delbrueckii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus delbrueckii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus delbrueckii; sb__Lactobacillus delbrueckii subsp. indicus; x__Lactobacillus delbrueckii subsp. indicus DSM 15996
NCBI Strain Identifiers DSM 15996
GTDB Type Material Designation type strain of subspecies
GTDB Representative of Species False (representative is GCA_001433875.1)
Genome Characteristics
CheckM Completeness 99.03%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 149
N50 Contigs 48,113 bp
Longest Contig 140,097 bp
Scaffold Count 139
N50 Scaffolds 51,275 bp
Longest Scaffold 140,097 bp
Genome Size 1,863,572 bp
Protein Count 1,869
Coding Density 86.36%
GC Percentage 49.58%
Ambiguous Bases N/A
GTDB representative GCA_001433875.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143579v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369368
Country India
Date 2015-11-6
Genbank Assembly Accession GCA_001435795.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source traditional dairy fermented product (Dahi type)
Latitude Longitude None
Molecule Count N/A
CDS Count 1,866
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 10
Species Taxid 1584
SSU Count 2
Submitter Shanghai Majorbio
Taxid 1423824
Total Gap Length 487
Translation Table 11
tRNA Count (total) 64
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZFL00000000.1