Limosilactobacillus ingluviei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus ingluviei
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ingluviei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus ingluviei; x__Lactobacillus ingluviei DSM 15946
NCBI Strain Identifiers DSM 15946
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.18%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 97
N50 Contigs 64,050 bp
Longest Contig 226,691 bp
Scaffold Count 88
N50 Scaffolds 70,439 bp
Longest Scaffold 227,543 bp
Genome Size 2,151,571 bp
Protein Count 2,134
Coding Density 87.24%
GC Percentage 49.89%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143577v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369402
Country Belgium
Date 2015-11-6
Genbank Assembly Accession GCA_001435775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source crop
Latitude Longitude None
Molecule Count N/A
CDS Count 2,092
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 9
Species Taxid 148604
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423760
Total Gap Length 90
Translation Table 11
tRNA Count (total) 72
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZFK00000000.1