Lactobacillus psittaci
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus psittaci
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus psittaci
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus psittaci; x__Lactobacillus psittaci DSM 15354
NCBI Strain Identifiers DSM 15354
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000425905.1)
Genome Characteristics
CheckM Completeness 97.11%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 17
Contig Count 51
N50 Contigs 163,342 bp
Longest Contig 317,114 bp
Scaffold Count 50
N50 Scaffolds 163,342 bp
Longest Scaffold 317,114 bp
Genome Size 1,541,412 bp
Protein Count 1,371
Coding Density 91.52%
GC Percentage 35.64%
Ambiguous Bases 9
GTDB representative GCA_000425905.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143569v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369382
Country Sweden
Date 2015-11-6
Genbank Assembly Accession GCA_001435695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lung
Latitude Longitude None
Molecule Count N/A
CDS Count 1,351
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 1
Species Taxid 116089
SSU Count 2
Submitter Shanghai Majorbio
Taxid 1122152
Total Gap Length 197
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZFB00000000.1