Lactobacillus amylolyticus
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus amylolyticus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus amylolyticus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus amylolyticus; x__Lactobacillus amylolyticus DSM 11664
NCBI Strain Identifiers DSM 11664
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000178475.1)
Genome Characteristics
CheckM Completeness 99.03%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 98
N50 Contigs 54,804 bp
Longest Contig 163,859 bp
Scaffold Count 98
N50 Scaffolds 54,804 bp
Longest Scaffold 163,859 bp
Genome Size 1,537,388 bp
Protein Count 1,604
Coding Density 87.75%
GC Percentage 38.24%
Ambiguous Bases 5
GTDB representative GCA_000178475.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143566v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369499
Country Germany
Date 2015-11-6
Genbank Assembly Accession GCA_001435665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source acidified beer wort
Latitude Longitude None
Molecule Count N/A
CDS Count 1,555
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 83683
SSU Count 1
Submitter Shanghai Majorbio
Taxid 585524
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEP00000000.1